BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032H04SP1|AL429643
(883 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1036 1388 0.0
3x_Contig456 204 2e-52
>3x_Contig1036
Length = 2982
Score = 1388 bits (700), Expect = 0.0
Identities = 707/708 (99%), Gaps = 1/708 (0%)
Strand = Plus / Minus
Query: 1 ctaacatatcctttaactgacagaaaattaaaacacgatgttgactaatgacgttatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ctaacatatcctttaactgacagaaaattaaaacacgatgttgactaatgacgttatcaa 658
Query: 61 tggagggatttttgttggacttcttttcaacgtcctggatgccaataccacattctagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 tggagggatttttgttggacttcttttcaacgtcctggatgccaataccacattctagta 598
Query: 121 acaaagtctttagagcttctaatttaggagcgtgtcctatgtcgtggagatccattccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 acaaagtctttagagcttctaatttaggagcgtgtcctatgtcgtggagatccattccag 538
Query: 181 tctgagaaaggtagctttgaacttgttggaattgaggatgcgaagaattcaaaaccaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tctgagaaaggtagctttgaacttgttggaattgaggatgcgaagaattcaaaaccaatg 478
Query: 241 acggatggttacatagctttctcatatattggagagcctggaaaatatgttgtttatttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 acggatggttacatagctttctcatatattggagagcctggaaaatatgttgtttatttt 418
Query: 301 cgacttcagcagtattttcgatgtctttttctaccacgttcttctgtttcttgacgaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 cgacttcagcagtattttcgatgtctttttctaccacgttcttctgtttcttgacgaagt 358
Query: 361 catntgtacaattgtttctgcaaatcacttagttcacagtaataatcttgaatgatcttt 420
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 cat-tgtacaattgtttctgcaaatcacttagttcacagtaataatcttgaatgatcttt 299
Query: 421 ggtggaagatcagacaacacttcttccttcaatcttctgagcatgaatggtagtacctgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ggtggaagatcagacaacacttcttccttcaatcttctgagcatgaatggtagtacctgt 239
Query: 481 ttatgcaaagcttctaatgccaaagcaccagcttcctgttcctttgacgatgttttacta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ttatgcaaagcttctaatgccaaagcaccagcttcctgttcctttgacgatgttttacta 179
Query: 541 tttctcgaactggcaattggttttgcaaatctttcttggaacatcttttctgtacctaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 tttctcgaactggcaattggttttgcaaatctttcttggaacatcttttctgtacctaag 119
Query: 601 aagccaggcatcaaaaagtcaaataatgaccataattcaactacattattctggatagga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 aagccaggcatcaaaaagtcaaataatgaccataattcaactacattattctggatagga 59
Query: 661 gtacccgtcaaaactaatctatgattggaattgattagcttcactgcc 708
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 gtacccgtcaaaactaatctatgattggaattgattagcttcactgcc 11
>3x_Contig456
Length = 1253
Score = 204 bits (103), Expect = 2e-52
Identities = 113/115 (98%), Gaps = 1/115 (0%)
Strand = Plus / Minus
Query: 770 agtcatattttttgagaaagtccacgtcatttctagcaacatcatatgaagtaacaacga 829
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1253 agtcattttttttgagaaagtccacgtcatttctagcaacatcatatgaagtaacaacga 1194
Query: 830 tatcagctgttggaacttgtccctgtaaaggatatcttaccgaa-gtccacctgc 883
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1193 tatcagctgttggaacttgtccctgtaaaggatatcttaccgaaggtccacctgc 1139
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7341
Number of Sequences: 1807
Number of extensions: 7341
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 2
length of query: 883
length of database: 10,358,551
effective HSP length: 16
effective length of query: 867
effective length of database: 10,329,639
effective search space: 8955797013
effective search space used: 8955797013
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)